nsv435958
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,065
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 99 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 100 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 21 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv435958 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 50,889,563 | 50,896,627 | - |
| nsv435958 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 50,926,994 | - | 50,935,895 |
| nsv435958 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 50,899,490 | - | 50,908,387 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv465999 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 468 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv465999 | Remapped | Pass | NC_000003.12:g.(50 889563_?)_(5089662 7_?)inv | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 50,889,563 | 50,896,627 | - |
| nssv465999 | Remapped | Good | NC_000003.11:g.(50 926994_?)_(?_50935 895)inv | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 50,926,994 | - | 50,935,895 |
| nssv465999 | Submitted genomic | NC_000003.10:g.(50 899490_?)_(?_50908 387)inv | NCBI36 (hg18) | NC_000003.10 | Chr3 | 50,899,490 | - | 50,908,387 |