nsv3565539
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a L1 mobile element relative to the reference
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 404 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 505 SVs from 56 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3565539 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 61,981,968 (-15, +15) | 61,981,968 (-15, +15) | ||
nsv3565539 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 45,118,120 (-15, +15) | 45,118,120 (-15, +15) |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14346085 | Submitted genomic | NC_000009.12:g.(61 981953_61981983)_( 61981953_61981983) ins437 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 61,981,968 (-15, +15) | 61,981,968 (-15, +15) | ||
nssv14346086 | Submitted genomic | NC_000009.12:g.(61 981953_61981983)_( 61981953_61981983) ins437 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 61,981,968 (-15, +15) | 61,981,968 (-15, +15) | ||
nssv14346085 | Remapped | Perfect | NC_000009.11:g.(45 118105_45118135)_( 45118105_45118135) ins437 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 45,118,120 (-15, +15) | 45,118,120 (-15, +15) |
nssv14346086 | Remapped | Perfect | NC_000009.11:g.(45 118105_45118135)_( 45118105_45118135) ins437 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 45,118,120 (-15, +15) | 45,118,120 (-15, +15) |