nsv3564919
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a L1 mobile element relative to the reference
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 119 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 119 SVs from 36 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3564919 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 97,420,352 (-15, +15) | 97,420,352 (-15, +15) | ||
nsv3564919 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 97,049,664 (-15, +15) | 97,049,664 (-15, +15) |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14335521 | Submitted genomic | NC_000007.14:g.(97 420337_97420367)_( 97420337_97420367) ins5875 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 97,420,352 (-15, +15) | 97,420,352 (-15, +15) | ||
nssv14335522 | Submitted genomic | NC_000007.14:g.(97 420337_97420367)_( 97420337_97420367) ins5875 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 97,420,352 (-15, +15) | 97,420,352 (-15, +15) | ||
nssv14335521 | Remapped | Perfect | NC_000007.13:g.(97 049649_97049679)_( 97049649_97049679) ins5875 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 97,049,664 (-15, +15) | 97,049,664 (-15, +15) |
nssv14335522 | Remapped | Perfect | NC_000007.13:g.(97 049649_97049679)_( 97049649_97049679) ins5875 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 97,049,664 (-15, +15) | 97,049,664 (-15, +15) |