nsv3520752
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:complex substitution
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:5
- Validation:Not tested
- Clinical Assertions: No
- Region Size:26,822
- Description:complex variant
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 153 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 153 SVs from 43 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3520752 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nsv3520752 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14336050 | complex substitution | HG00512 | Sequencing | Sequence alignment | Heterozygous | 13,827 |
| nssv14336051 | complex substitution | HG00514 | Sequencing | Sequence alignment | Heterozygous | 39,861 |
| nssv14336052 | complex substitution | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
| nssv14336053 | complex substitution | SAMN00006581 | Sequencing | Sequence alignment | Heterozygous | 41,185 |
| nssv14336054 | complex substitution | SAMN00001695 | Sequencing | Sequence alignment | Heterozygous | 15,732 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv14336050 | Submitted genomic | GRCh38 (hg38) | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nssv14336051 | Submitted genomic | GRCh38 (hg38) | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nssv14336052 | Submitted genomic | GRCh38 (hg38) | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nssv14336053 | Submitted genomic | GRCh38 (hg38) | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nssv14336054 | Submitted genomic | GRCh38 (hg38) | NC_000007.14 | Chr7 | 91,481,359 (-4, +5) | 91,508,180 (-7, +0) | ||
| nssv14336050 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |
| nssv14336051 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |
| nssv14336052 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |
| nssv14336053 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |
| nssv14336054 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,110,674 (-4, +5) | 91,137,495 (-7, +0) |