nsv3418293
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 272 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 272 SVs from 44 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3418293 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 154,113,627 | 154,113,627 | ||
| nsv3418293 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 153,810,712 | 153,810,712 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14765771 | alu insertion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14765771 | Submitted genomic | NC_000007.14:g.154 113627_154113628in s203 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 154,113,627 | 154,113,627 | ||
| nssv14765771 | Remapped | Perfect | NC_000007.13:g.153 810712_153810713in s203NC_000007.13:g .153810712_1538107 13ins203 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 153,810,712 | 153,810,712 |