nsv3169183
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 113 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 141 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 113 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 141 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3169183 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 104,265,249 (-12, +12) | 104,265,249 (-12, +12) | + |
| nsv3169183 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 78,231,258 (-12, +12) | 78,231,258 (-12, +12) | - |
| nsv3169183 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 104,881,707 (-12, +12) | 104,881,707 (-12, +12) | + | ||
| nsv3169183 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 78,523,600 (-12, +12) | 78,523,600 (-12, +12) | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240307 | interchromosomal translocation | DB97 | Sequencing | Paired-end mapping | 11 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240307 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 104,265,249 (-12, +12) | 104,265,249 (-12, +12) | + |
| nssv14240307 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 78,231,258 (-12, +12) | 78,231,258 (-12, +12) | - |
| nssv14240307 | Submitted genomic | GRCh37 (hg19) | NC_000002.11 | Chr2 | 104,881,707 (-12, +12) | 104,881,707 (-12, +12) | + | ||
| nssv14240307 | Submitted genomic | GRCh37 (hg19) | NC_000015.9 | Chr15 | 78,523,600 (-12, +12) | 78,523,600 (-12, +12) | - |