nsv3168697
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:62,808
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 291 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 291 SVs from 59 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3168697 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 43,125,679 (-1, +1) | 43,188,486 (-1, +1) |
| nsv3168697 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 41,754,319 (-1, +1) | 41,817,126 (-1, +1) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240097 | inversion | DB106 | Sequencing | Paired-end mapping | 27 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240097 | Remapped | Perfect | NC_000020.11:g.(43 125678_43125680)_( 43188485_43188487) inv186 | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 43,125,679 (-1, +1) | 43,188,486 (-1, +1) |
| nssv14240097 | Submitted genomic | NC_000020.10:g.(41 754318_41754320)_( 41817125_41817127) inv186 | GRCh37 (hg19) | NC_000020.10 | Chr20 | 41,754,319 (-1, +1) | 41,817,126 (-1, +1) |