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dbVar

Database of genomic structural variation

nsv3168359

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:37,881

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 658 SVs from 69 studies. See in: genome view

Remapped(Score: Perfect):14,688,859-14,726,745

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168359	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	14,688,862 (-3, +3)	14,726,742 (-3, +3)
nsv3168359	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	14,669,508 (-3, +3)	14,707,388 (-3, +3)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239395	deletion	DB106	Sequencing	Paired-end mapping	27

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239395	Remapped	Perfect	NC_000020.11:g.(14 688859_14688865)_( 14726739_14726745) del	GRCh38.p12	First Pass	NC_000020.11	Chr20	14,688,862 (-3, +3)	14,726,742 (-3, +3)
nssv14239395	Submitted genomic		NC_000020.10:g.(14 669505_14669511)_( 14707385_14707391) del	GRCh37 (hg19)		NC_000020.10	Chr20	14,669,508 (-3, +3)	14,707,388 (-3, +3)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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