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dbVar

Database of genomic structural variation

nsv2763689

Organism: Homo sapiens

Study:nstd130 (Leppa et al. 2016)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:54,386

Publication(s):Leppa et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2355 SVs from 95 studies. See in: genome view

Remapped(Score: Perfect):78,265,265-78,319,650

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv2763689	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nsv2763689	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	78,974,982	79,029,367

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv13635803	deletion	SNP array	Probe signal intensity
nssv13635804	deletion	SNP array	Probe signal intensity
nssv13635805	deletion	SNP array	Probe signal intensity
nssv13635806	deletion	SNP array	Probe signal intensity
nssv13635807	deletion	SNP array	Probe signal intensity
nssv13635808	deletion	SNP array	Probe signal intensity
nssv13635809	deletion	SNP array	Probe signal intensity
nssv13635810	deletion	SNP array	Probe signal intensity
nssv13635811	duplication	SNP array	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv13635803	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635804	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635805	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635806	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635807	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635808	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635809	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635810	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635811	Remapped	Perfect	NC_000006.12:g.(?_ 78265265)_(7831965 0_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,265,265	78,319,650
nssv13635803	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635804	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635805	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635806	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635807	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635808	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635809	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635810	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367
nssv13635811	Submitted genomic		NC_000006.11:g.(?_ 78974982)_(7902936 7_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	78,974,982	79,029,367

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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