nsv241
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:44,942
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 209 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 209 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 7 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv241 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 108,007,742 | 108,052,683 |
| nsv241 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 107,726,589 | 107,771,530 |
| nsv241 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000003.9 | Chr3 | 109,209,279 | 109,254,220 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv241 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv241 | Remapped | Perfect | NC_000003.12:g.(10 8007742_?)_(?_1080 52683)inv | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 108,007,742 | 108,052,683 |
| nssv241 | Remapped | Perfect | NC_000003.11:g.(10 7726589_?)_(?_1077 71530)inv | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 107,726,589 | 107,771,530 |
| nssv241 | Submitted genomic | NC_000003.9:g.(109 209279_?)_(?_10925 4220)inv | NCBI35 (hg17) | NC_000003.9 | Chr3 | 109,209,279 | 109,254,220 |