nsv1195941
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:79,562
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 302 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 302 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 104 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1195941 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 87,061,919 | 87,141,480 |
| nsv1195941 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 86,691,235 | 86,770,796 |
| nsv1195941 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 86,529,171 | 86,608,732 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7465989 | copy number gain | 12829 | Oligo aCGH | Probe signal intensity | nssv7458978 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7465989 | Remapped | Perfect | NC_000007.14:g.(?_ 87061919)_(8714148 0_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 87,061,919 | 87,141,480 |
| nssv7465989 | Remapped | Perfect | NC_000007.13:g.(?_ 86691235)_(8677079 6_?)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 86,691,235 | 86,770,796 |
| nssv7465989 | Submitted genomic | NC_000007.12:g.(?_ 86529171)_(8660873 2_?)dup | NCBI36 (hg18) | NC_000007.12 | Chr7 | 86,529,171 | 86,608,732 |