nsv1193555
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:672,362
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2005 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 2007 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 658 SVs from 30 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1193555 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 31,096,479 | 31,768,840 |
| nsv1193555 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 31,118,026 | 31,790,388 |
| nsv1193555 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 31,074,602 | 31,746,964 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7468955 | copy number gain | 30350 | Oligo aCGH | Probe signal intensity | nssv7459773 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7468955 | Remapped | Perfect | NC_000011.10:g.(?_ 31096479)_(3176884 0_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 31,096,479 | 31,768,840 |
| nssv7468955 | Remapped | Perfect | NC_000011.9:g.(?_3 1118026)_(31790388 _?)dup | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 31,118,026 | 31,790,388 |
| nssv7468955 | Submitted genomic | NC_000011.8:g.(?_3 1074602)_(31746964 _?)dup | NCBI36 (hg18) | NC_000011.8 | Chr11 | 31,074,602 | 31,746,964 |