nsv1192785
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,528,462
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 28470 SVs from 134 studies. See in: genome view
Overlapping variant regions from other studies: 28474 SVs from 134 studies. See in: genome view
Overlapping variant regions from other studies: 9011 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1192785 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 21,838,013 | 32,366,474 |
| nsv1192785 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 21,859,559 | 32,388,020 |
| nsv1192785 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 21,816,135 | 32,344,596 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7466256 | copy number loss | 25198 | Oligo aCGH | Probe signal intensity | nssv7459605 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7466256 | Remapped | Perfect | NC_000011.10:g.(?_ 21838013)_(3236647 4_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 21,838,013 | 32,366,474 |
| nssv7466256 | Remapped | Perfect | NC_000011.9:g.(?_2 1859559)_(32388020 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 21,859,559 | 32,388,020 |
| nssv7466256 | Submitted genomic | NC_000011.8:g.(?_2 1816135)_(32344596 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 21,816,135 | 32,344,596 |