nsv1191559
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:781,239
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3332 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 3334 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 953 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1191559 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 8,094,614 | 8,875,852 |
| nsv1191559 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 8,144,616 | 8,969,709 |
| nsv1191559 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 8,084,617 | 8,877,210 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7466579 | copy number gain | 17840 | Oligo aCGH | Probe signal intensity | nssv7459786 |
| nssv7473874 | copy number gain | 17906 | Oligo aCGH | Probe signal intensity | nssv7471878 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7466579 | Remapped | Good | NC_000016.10:g.(?_ 8094614)_(8875852_ ?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 8,094,614 | 8,875,852 |
| nssv7473874 | Remapped | Good | NC_000016.10:g.(?_ 8094614)_(8875852_ ?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 8,094,614 | 8,875,852 |
| nssv7466579 | Remapped | Good | NC_000016.9:g.(?_8 144616)_(8969709_? )dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 8,144,616 | 8,969,709 |
| nssv7473874 | Remapped | Good | NC_000016.9:g.(?_8 144616)_(8969709_? )dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 8,144,616 | 8,969,709 |
| nssv7466579 | Submitted genomic | NC_000016.8:g.(?_8 084617)_(8877210_? )dup | NCBI36 (hg18) | NC_000016.8 | Chr16 | 8,084,617 | 8,877,210 | ||
| nssv7473874 | Submitted genomic | NC_000016.8:g.(?_8 084617)_(8877210_? )dup | NCBI36 (hg18) | NC_000016.8 | Chr16 | 8,084,617 | 8,877,210 |