nsv1161837
- Organism: Homo sapiens
- Study:nstd111 (Lou et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:93,779
- Publication(s):Lou et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2329 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 2333 SVs from 91 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv1161837 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 12,007,658 | 12,008,577 | 12,099,458 | 12,101,436 |
nsv1161837 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 12,007,658 | 12,008,577 | 12,099,458 | 12,101,436 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv4037352 | deletion | SNP array | Probe signal intensity | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv4037352 | Remapped | Perfect | NC_000009.12:g.(12 007658_12008577)_( 12099458_12101436) del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 12,007,658 | 12,008,577 | 12,099,458 | 12,101,436 |
nssv4037352 | Submitted genomic | NC_000009.11:g.(12 007658_12008577)_( 12099458_12101436) del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 12,007,658 | 12,008,577 | 12,099,458 | 12,101,436 |