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dbVar

Database of genomic structural variation

nsv1161118

Organism: Homo sapiens

Study:nstd111 (Lou et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:17,335

Publication(s):Lou et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 249 SVs from 66 studies. See in: genome view

Remapped(Score: Perfect):97,250,644-97,267,978

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1161118	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	97,250,644	97,251,263	97,263,981	97,267,978
nsv1161118	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	98,171,795	98,172,414	98,185,132	98,189,129

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4029167	deletion	SNP array	Probe signal intensity	1
nssv4029168	deletion	SNP array	Probe signal intensity	1
nssv4029169	duplication	SNP array	Probe signal intensity	3
nssv4029170	deletion	SNP array	Probe signal intensity	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4029167	Remapped	Perfect	NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	97,250,644	97,251,263	97,263,981	97,267,978
nssv4029168	Remapped	Perfect	NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	97,250,644	97,251,263	97,263,981	97,267,978
nssv4029169	Remapped	Perfect	NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	97,250,644	97,251,263	97,263,981	97,267,978
nssv4029170	Remapped	Perfect	NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	97,250,644	97,251,263	97,263,981	97,267,978
nssv4029167	Submitted genomic		NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del	GRCh37 (hg19)		NC_000004.11	Chr4	98,171,795	98,172,414	98,185,132	98,189,129
nssv4029168	Submitted genomic		NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del	GRCh37 (hg19)		NC_000004.11	Chr4	98,171,795	98,172,414	98,185,132	98,189,129
nssv4029169	Submitted genomic		NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) dup	GRCh37 (hg19)		NC_000004.11	Chr4	98,171,795	98,172,414	98,185,132	98,189,129
nssv4029170	Submitted genomic		NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del	GRCh37 (hg19)		NC_000004.11	Chr4	98,171,795	98,172,414	98,185,132	98,189,129

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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