nsv1159799
- Organism: Homo sapiens
- Study:nstd111 (Lou et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:127,208
- Publication(s):Lou et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 899 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 899 SVs from 80 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1159799 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 189,357,207 | 189,358,005 | 189,484,017 | 189,484,414 |
| nsv1159799 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 189,326,337 | 189,327,135 | 189,453,147 | 189,453,544 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4026006 | deletion | SNP array | Probe signal intensity | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4026006 | Remapped | Perfect | NC_000001.11:g.(18 9357207_189358005) _(189484017_189484 414)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 189,357,207 | 189,358,005 | 189,484,017 | 189,484,414 |
| nssv4026006 | Submitted genomic | NC_000001.10:g.(18 9326337_189327135) _(189453147_189453 544)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 189,326,337 | 189,327,135 | 189,453,147 | 189,453,544 |