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dbVar

Database of genomic structural variation

nsv1159659

Organism: Homo sapiens

Study:nstd106 (Alsmadi et al. 2014)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Alsmadi et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 97 SVs from 24 studies. See in: genome view

Remapped(Score: Perfect):50,362,367-50,362,367

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1159659	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	50,362,367	50,362,367	not reported
nsv1159659	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	50,362,475	50,362,475	not reported
nsv1159659	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	50,829,085	50,829,085	not reported
nsv1159659	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	50,829,193	50,829,193	not reported

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv4024668	intrachromosomal translocation	KWS2	Sequencing	Read depth and paired-end mapping	21,718

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv4024668	Remapped	Perfect	GRCh38.p12	First Pass	NC_000014.9	Chr14	50,362,367	50,362,367	not reported
nssv4024668	Remapped	Perfect	GRCh38.p12	First Pass	NC_000014.9	Chr14	50,362,475	50,362,475	not reported
nssv4024668	Submitted genomic		GRCh37 (hg19)		NC_000014.8	Chr14	50,829,085	50,829,085	not reported
nssv4024668	Submitted genomic		GRCh37 (hg19)		NC_000014.8	Chr14	50,829,193	50,829,193	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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