nsv1077775
- Organism: Homo sapiens
- Study:nstd99 (Thareja et al. 2015)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,779
- Publication(s):Thareja et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 303 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 303 SVs from 56 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1077775 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 179,546,696 | 179,551,474 |
| nsv1077775 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 180,411,423 | 180,416,201 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3765317 | inversion | KWP1 | Sequencing | Read depth and paired-end mapping | 11,116 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3765317 | Remapped | Perfect | NC_000002.12:g.179 546696_179551474in v | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 179,546,696 | 179,551,474 |
| nssv3765317 | Submitted genomic | NC_000002.11:g.180 411423_180416201in v | GRCh37 (hg19) | NC_000002.11 | Chr2 | 180,411,423 | 180,416,201 |