nsv1069412
- Organism: Homo sapiens
- Study:nstd99 (Thareja et al. 2015)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Thareja et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 157 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 466 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 157 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 460 SVs from 24 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv1069412 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 76,835,369 | 76,835,369 | - |
nsv1069412 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 144,712,380 | 144,712,380 | - |
nsv1069412 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 77,747,605 | 77,747,605 | - | ||
nsv1069412 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 143,793,901 | 143,793,901 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv3768204 | interchromosomal translocation | KWP1 | Sequencing | Read depth and paired-end mapping | 11,116 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv3768204 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 76,835,369 | 76,835,369 | - |
nssv3768204 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 144,712,380 | 144,712,380 | - |
nssv3768204 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 77,747,605 | 77,747,605 | - | ||
nssv3768204 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 143,793,901 | 143,793,901 | - |