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dbVar

Database of genomic structural variation

nsv1069396

Organism: Homo sapiens

Study:nstd99 (Thareja et al. 2015)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Thareja et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 402 SVs from 43 studies. See in: genome view

Remapped(Score: Perfect):74,200,119-74,200,119

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1069396	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	74,200,119	74,200,119	-
nsv1069396	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	69,838,450	69,838,450	-
nsv1069396	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	73,614,449	73,614,449	-
nsv1069396	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	67,834,591	67,834,591	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3763939	interchromosomal translocation	KWP1	Sequencing	Read depth and paired-end mapping	11,116

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv3763939	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	74,200,119	74,200,119	-
nssv3763939	Remapped	Perfect	GRCh38.p12	First Pass	NC_000017.11	Chr17	69,838,450	69,838,450	-
nssv3763939	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	73,614,449	73,614,449	-
nssv3763939	Submitted genomic		GRCh37 (hg19)		NC_000017.10	Chr17	67,834,591	67,834,591	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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