Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv1069389

Organism: Homo sapiens

Study:nstd99 (Thareja et al. 2015)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Thareja et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 95 SVs from 16 studies. See in: genome view

Remapped(Score: Perfect):143,799,632-143,799,632

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1069389	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	143,799,632	143,799,632	+
nsv1069389	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	153,304,979	153,304,979	+
nsv1069389	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	144,120,769	144,120,769	+
nsv1069389	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	153,002,064	153,002,064	+

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3766712	interchromosomal translocation	KWP1	Sequencing	Read depth and paired-end mapping	11,116

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv3766712	Remapped	Perfect	GRCh38.p12	First Pass	NC_000006.12	Chr6	143,799,632	143,799,632	+
nssv3766712	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,304,979	153,304,979	+
nssv3766712	Submitted genomic		GRCh37 (hg19)		NC_000006.11	Chr6	144,120,769	144,120,769	+
nssv3766712	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	153,002,064	153,002,064	+

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI