nsv1015613
- Organism: Homo sapiens
- Study:nstd100 (Coe et al. 2014)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:778,061
- Publication(s):Coe et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2581 SVs from 103 studies. See in: genome view
Overlapping variant regions from other studies: 2581 SVs from 103 studies. See in: genome view
Overlapping variant regions from other studies: 903 SVs from 31 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1015613 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 102,965,216 | 103,743,276 |
| nsv1015613 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 103,413,091 | 104,191,151 |
| nsv1015613 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 103,519,784 | 104,297,844 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv3445265 | copy number loss | 9870722 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3445265 | Remapped | Perfect | NC_000006.12:g.(?_ 102965216)_(103743 276_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 102,965,216 | 103,743,276 |
| nssv3445265 | Remapped | Perfect | NC_000006.11:g.(?_ 103413091)_(104191 151_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 103,413,091 | 104,191,151 |
| nssv3445265 | Submitted genomic | NC_000006.10:g.(?_ 103519784)_(104297 844_?)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 103,519,784 | 104,297,844 |