nsv98
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,851,736
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 11470 SVs from 120 studies. See in: genome view
Overlapping variant regions from other studies: 11398 SVs from 123 studies. See in: genome view
Overlapping variant regions from other studies: 729 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv98 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 20,420,291 | 22,272,026 |
| nsv98 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 20,625,544 | 22,559,977 |
| nsv98 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000015.8 | Chr15 | 18,885,558 | 20,061,341 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv98 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv98 | Remapped | Pass | NC_000015.10:g.(20 420291_?)_(?_22272 026)inv | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 20,420,291 | 22,272,026 |
| nssv98 | Remapped | Pass | NC_000015.9:g.(206 25544_?)_(?_225599 77)inv | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 20,625,544 | 22,559,977 |
| nssv98 | Submitted genomic | NC_000015.8:g.(188 85558_?)_(?_200613 41)inv | NCBI35 (hg17) | NC_000015.8 | Chr15 | 18,885,558 | 20,061,341 |