nsv429710
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:661,858
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2257 SVs from 86 studies. See in: genome view
Overlapping variant regions from other studies: 2257 SVs from 86 studies. See in: genome view
Overlapping variant regions from other studies: 631 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429710 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 111,520,231 | 112,182,088 |
| nsv429710 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 114,282,511 | 114,944,368 |
| nsv429710 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 113,322,332 | 113,984,189 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459496 | copy number gain | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459496 | Remapped | Perfect | NC_000009.12:g.(?_ 111520231)_(112182 088_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 111,520,231 | 112,182,088 |
| nssv459496 | Remapped | Perfect | NC_000009.11:g.(?_ 114282511)_(114944 368_?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 114,282,511 | 114,944,368 |
| nssv459496 | Submitted genomic | NC_000009.10:g.(?_ 113322332)_(113984 189_?)dup | NCBI36 (hg18) | NC_000009.10 | Chr9 | 113,322,332 | 113,984,189 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459496 | NCBI36: NC_000009.10:g.(?_113322332)_(113984189_?)dup | copy number gain | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |