nsv8324
- Organism: Homo sapiens
- Study:nstd4 (Perry et al. 2008)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:20
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,049
- Publication(s):Perry et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 125 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 125 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv8324 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,424,588 |
| nsv8324 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,484,645 |
| nsv8324 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000001.8 | Chr1 | 10,415,863 | 10,418,911 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv11773 | copy number loss | NA18504 | Oligo aCGH | Probe signal intensity | 700 |
| nssv12119 | copy number loss | NA19173 | Oligo aCGH | Probe signal intensity | 603 |
| nssv21428 | copy number loss | NA12155 | Oligo aCGH | Probe signal intensity | 667 |
| nssv21445 | copy number loss | NA18980 | Oligo aCGH | Probe signal intensity | 561 |
| nssv24596 | copy number loss | NA10847 | Oligo aCGH | Probe signal intensity | 437 |
| nssv24601 | copy number loss | NA12802 | Oligo aCGH | Probe signal intensity | 447 |
| nssv24608 | copy number loss | NA18563 | Oligo aCGH | Probe signal intensity | 588 |
| nssv24609 | copy number loss | NA18564 | Oligo aCGH | Probe signal intensity | 553 |
| nssv24615 | copy number loss | NA18975 | Oligo aCGH | Probe signal intensity | 529 |
| nssv26875 | copy number loss | NA07029 | Oligo aCGH | Probe signal intensity | 544 |
| nssv26887 | copy number loss | NA18517 | Oligo aCGH | Probe signal intensity | 698 |
| nssv26889 | copy number loss | NA18552 | Oligo aCGH | Probe signal intensity | 537 |
| nssv26893 | copy number loss | NA18853 | Oligo aCGH | Probe signal intensity | 569 |
| nssv28037 | copy number loss | NA18502 | Oligo aCGH | Probe signal intensity | 703 |
| nssv28046 | copy number loss | NA18860 | Oligo aCGH | Probe signal intensity | 768 |
| nssv28052 | copy number loss | NA19132 | Oligo aCGH | Probe signal intensity | 684 |
| nssv28538 | copy number loss | NA12740 | Oligo aCGH | Probe signal intensity | 572 |
| nssv28548 | copy number loss | NA18572 | Oligo aCGH | Probe signal intensity | 483 |
| nssv29251 | copy number loss | NA10839 | Oligo aCGH | Probe signal intensity | 550 |
| nssv29270 | copy number loss | NA18972 | Oligo aCGH | Probe signal intensity | 693 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv11773 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv12119 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv21428 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv21445 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv24596 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv24601 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv24608 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv24609 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv24615 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv26875 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv26887 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv26889 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv26893 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv28037 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv28046 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv28052 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv28538 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv28548 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv29251 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv29270 | Remapped | Perfect | NC_000001.11:g.(10 421540_10422691)_( 10423389_10424588) del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 10,421,540 | 10,422,691 | 10,423,389 | 10,424,588 |
| nssv11773 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv12119 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv21428 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv21445 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv24596 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv24601 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv24608 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv24609 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv24615 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv26875 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv26887 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv26889 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv26893 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv28037 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv28046 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv28052 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv28538 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv28548 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv29251 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv29270 | Remapped | Perfect | NC_000001.10:g.(10 481597_10482748)_( 10483446_10484645) del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 10,481,597 | 10,482,748 | 10,483,446 | 10,484,645 |
| nssv11773 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv12119 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv21428 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv21445 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv24596 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv24601 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv24608 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv24609 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv24615 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv26875 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv26887 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv26889 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv26893 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv28037 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv28046 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv28052 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv28538 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv28548 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv29251 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 | ||
| nssv29270 | Submitted genomic | NC_000001.8:g.(104 15863_10417014)_(1 0417712_10418911)d el | NCBI35 (hg17) | NC_000001.8 | Chr1 | 10,415,863 | 10,417,014 | 10,417,712 | 10,418,911 |