nsv6136888
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 80 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 83 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 83 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv6136888 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 132,385,234 | 132,385,234 | + |
| nsv6136888 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 38,770,776 | 38,770,776 | + |
| nsv6136888 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 132,104,078 | 132,104,078 | + | ||
| nsv6136888 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 38,772,397 | 38,772,397 | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17683389 | interchromosomal translocation | SAMN20524661 | Sequencing | Paired-end mapping | 62 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv17683389 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 132,385,234 | 132,385,234 | + |
| nssv17683389 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 38,770,776 | 38,770,776 | + |
| nssv17683389 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 132,104,078 | 132,104,078 | + | ||
| nssv17683389 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 38,772,397 | 38,772,397 | + |