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dbVar

Database of genomic structural variation

esv3871533

Organism: Homo sapiens

Study:estd219 (1000 Genomes Consortium Phase 3 Integrated SV)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:40,609

Publication(s):1000 Genomes Consortium Phase 3 Integrated SV

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 348 SVs from 34 studies. See in: genome view

Remapped(Score: Perfect):90,841,638-90,882,490

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3871533	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	90,841,760 (-122, +122)	90,882,368 (-122, +122)
esv3871533	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	91,494,014 (-122, +122)	91,534,622 (-122, +122)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv23285701	inversion	NA20897	Sequencing	Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping	Heterozygous	3,491

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv23285701	Remapped	Perfect	NC_000013.11:g.(90 841638_90841882)_( 90882246_90882490) inv	GRCh38.p12	First Pass	NC_000013.11	Chr13	90,841,760 (-122, +122)	90,882,368 (-122, +122)
essv23285701	Submitted genomic		NC_000013.10:g.(91 493892_91494136)_( 91534500_91534744) inv	GRCh37 (hg19)		NC_000013.10	Chr13	91,494,014 (-122, +122)	91,534,622 (-122, +122)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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