esv3862
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:110,967
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 777 SVs from 76 studies. See in: genome view
Overlapping variant regions from other studies: 419 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 777 SVs from 76 studies. See in: genome view
Overlapping variant regions from other studies: 313 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3862 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 11,930,841 | 12,035,716 |
| esv3862 | Remapped | Pass | GRCh38.p12 | PATCHES | Second Pass | NW_018654717.1 | Chr8|NW_01 8654717.1 | 1,306,224 | 1,417,190 |
| esv3862 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 11,788,350 | 11,893,225 |
| esv3862 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 11,825,759 | 11,930,634 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv26303 | sequence alteration | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|
| essv26303 | Remapped | Pass | GRCh38.p12 | Second Pass | NW_018654717.1 | Chr8|NW_01 8654717.1 | 1,306,224 | 1,417,190 |
| essv26303 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 11,930,841 | 12,035,716 |
| essv26303 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 11,788,350 | 11,893,225 |
| essv26303 | Submitted genomic | NCBI36 (hg18) | NC_000008.9 | Chr8 | 11,825,759 | 11,930,634 |