esv3808465
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:Chr15:g.o(84347542_84347942)_chr15:(93359110_9
3359510)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 138 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 153 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 140 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 153 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3808465 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 83,678,790 | 83,679,190 | 83,678,790 | 83,679,190 | - |
| esv3808465 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 92,815,880 | 92,816,280 | 92,815,880 | 92,816,280 | |
| esv3808465 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 84,347,542 | 84,347,942 | 84,347,542 | 84,347,942 | - | ||
| esv3808465 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 93,359,110 | 93,359,510 | 93,359,110 | 93,359,510 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16637527 | intrachromosomal translocation | 1126084 | Curated | Curated | 246 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16637527 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 83,678,790 | 83,679,190 | 83,678,790 | 83,679,190 | - |
| essv16637527 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 92,815,880 | 92,816,280 | 92,815,880 | 92,816,280 | not reported |
| essv16637527 | Submitted genomic | GRCh37 (hg19) | NC_000015.9 | Chr15 | 84,347,542 | 84,347,942 | 84,347,542 | 84,347,942 | - | ||
| essv16637527 | Submitted genomic | GRCh37 (hg19) | NC_000015.9 | Chr15 | 93,359,110 | 93,359,510 | 93,359,110 | 93,359,510 | not reported |