esv3799591
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:
Chr1:g.(89796783_89797183)_chr1:o(89833272_89833672)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 66 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 66 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 23 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|---|
esv3799591 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 89,331,100 | 89,331,500 | 89,331,100 | 89,331,500 | |
esv3799591 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 89,367,713 | 89,368,113 | 89,367,713 | 89,368,113 | - |
esv3799591 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 89,796,783 | 89,797,183 | 89,796,783 | 89,797,183 | |||
esv3799591 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 89,833,272 | 89,833,672 | 89,833,272 | 89,833,672 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv16627634 | intrachromosomal translocation | 749709 | Curated | Curated | 261 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|
essv16627634 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 89,331,100 | 89,331,500 | 89,331,100 | 89,331,500 | not reported |
essv16627634 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 89,367,713 | 89,368,113 | 89,367,713 | 89,368,113 | - |
essv16627634 | Submitted genomic | GRCh37 (hg19) | NC_000001.10 | Chr1 | 89,796,783 | 89,797,183 | 89,796,783 | 89,797,183 | not reported | ||
essv16627634 | Submitted genomic | GRCh37 (hg19) | NC_000001.10 | Chr1 | 89,833,272 | 89,833,672 | 89,833,272 | 89,833,672 | - |