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dbVar

Database of genomic structural variation

esv3792621

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:complex chromosomal rearrangement
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:401

Description:Chr11:g.o(47381132_47381532)_chr11:(47405851_4
7406251)bkpt
Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 69 SVs from 25 studies. See in: genome view

Remapped(Score: Perfect):47,359,581-47,359,981

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
esv3792621	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	47,359,581	47,359,981	47,359,581	47,359,981	-
esv3792621	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	47,384,300	47,384,700	47,384,300	47,384,700
esv3792621	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	47,381,132	47,381,532	47,381,132	47,381,532	-
esv3792621	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	47,405,851	47,406,251	47,405,851	47,406,251

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16619851	intrachromosomal translocation	1126506	Curated	Curated	96

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
essv16619851	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	47,359,581	47,359,981	47,359,581	47,359,981	-
essv16619851	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	47,384,300	47,384,700	47,384,300	47,384,700	not reported
essv16619851	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	47,381,132	47,381,532	47,381,132	47,381,532	-
essv16619851	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	47,405,851	47,406,251	47,405,851	47,406,251	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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