esv3692360
- Organism: Homo sapiens
- Study:estd220 (Pettigrew et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:86,095
- Publication(s):Pettigrew et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 903 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 903 SVs from 63 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3692360 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 6,898,174 | 6,898,174 | 6,984,267 | 6,984,268 |
| esv3692360 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 6,948,175 | 6,948,175 | 7,034,268 | 7,034,269 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16506632 | deletion | FR-32 | SNP array | SNP genotyping analysis | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16506632 | Remapped | Perfect | NC_000016.10:g.(68 98174_6898174)_(69 84267_6984268)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 6,898,174 | 6,898,174 | 6,984,267 | 6,984,268 |
| essv16506632 | Submitted genomic | NC_000016.9:g.(694 8175_6948175)_(703 4268_7034269)del86 093 | GRCh37 (hg19) | NC_000016.9 | Chr16 | 6,948,175 | 6,948,175 | 7,034,268 | 7,034,269 |