esv3671614
- Organism: Homo sapiens
- Study:estd217 (Besenbacher et al. 2015)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,744
- Publication(s):Besenbacher et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 602 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 53 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 191 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 602 SVs from 49 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3671614 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 70,943,795 | 70,946,538 |
| esv3671614 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003315917.2 | Chr5|NW_00 3315917.2 | 464,253 | 466,993 |
| esv3671614 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_2 | Second Pass | NT_187651.1 | Chr5|NT_18 7651.1 | 492,228 | 494,970 |
| esv3671614 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 70,239,622 | 70,242,365 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv16493656 | sequence alteration | Sequencing | de novo sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| essv16493656 | Remapped | Good | GRCh38.p12 | Second Pass | NW_003315917.2 | Chr5|NW_00 3315917.2 | 464,253 | 466,993 |
| essv16493656 | Remapped | Good | GRCh38.p12 | Second Pass | NT_187651.1 | Chr5|NT_18 7651.1 | 492,228 | 494,970 |
| essv16493656 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 70,943,795 | 70,946,538 |
| essv16493656 | Submitted genomic | GRCh37 (hg19) | NC_000005.9 | Chr5 | 70,239,622 | 70,242,365 |