esv3644097
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:208,612
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 795 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 795 SVs from 62 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
esv3644097 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 28,191,607 | 28,400,218 |
esv3644097 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 28,682,514 | 28,891,125 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
essv16031444 | duplication | SAMN01761222 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,312 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
essv16031444 | Remapped | Perfect | NC_000019.10:g.281 91607_28400218dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 28,191,607 | 28,400,218 |
essv16031444 | Submitted genomic | NC_000019.9:g.2868 2514_28891125dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 28,682,514 | 28,891,125 |