esv3584915
- Organism: Homo sapiens
- Study:estd213 (Mokhtar et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:60,532
- Publication(s):Mokhtar et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 261 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 261 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 94 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3584915 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 85,088,630 | 85,149,161 |
| esv3584915 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 87,703,545 | 87,764,076 |
| esv3584915 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 86,893,365 | 86,953,896 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv9838702 | copy number loss | KSF005 | SNP array | Probe signal intensity | 45 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv9838702 | Remapped | Perfect | NC_000009.12:g.(?_ 85088630)_(8514916 1_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 85,088,630 | 85,149,161 |
| essv9838702 | Remapped | Perfect | NC_000009.11:g.(?_ 87703545)_(8776407 6_?)del | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 87,703,545 | 87,764,076 |
| essv9838702 | Submitted genomic | NC_000009.10:g.(?_ 86893365)_(8695389 6_?)del | NCBI36 (hg18) | NC_000009.10 | Chr9 | 86,893,365 | 86,953,896 |