esv3310448
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:711
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 82 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 82 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 22 SVs from 9 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv3310448 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 31,903,113 | 31,903,823 | 31,903,113 | 31,903,823 |
esv3310448 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 32,299,099 | 32,299,809 | 32,299,099 | 32,299,809 |
esv3310448 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 30,629,099 | 30,629,809 | 30,629,099 | 30,629,809 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7843529 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv7843529 | Remapped | Perfect | NC_000022.11:g.(31 903113_31903823)_( 31903113_31903823) ins495 | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 31,903,113 | 31,903,823 | 31,903,113 | 31,903,823 |
essv7843529 | Remapped | Perfect | NC_000022.10:g.(32 299099_32299809)_( 32299099_32299809) ins495 | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 32,299,099 | 32,299,809 | 32,299,099 | 32,299,809 |
essv7843529 | Submitted genomic | NC_000022.9:g.(306 29099_30629809)_(3 0629099_30629809)i ns495 | NCBI36 (hg18) | NC_000022.9 | Chr22 | 30,629,099 | 30,629,809 | 30,629,099 | 30,629,809 |