esv3310431
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,301
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 163 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 163 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 59 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310431 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 82,152,625 | 82,154,925 | 82,152,625 | 82,154,925 |
| esv3310431 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 82,201,776 | 82,204,076 | 82,201,776 | 82,204,076 |
| esv3310431 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 82,284,466 | 82,286,766 | 82,284,466 | 82,286,766 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843574 | novel sequence insertion | SAMN00001696 | Sequencing | Other | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843574 | Remapped | Perfect | NC_000003.12:g.(82 152625_82154925)_( 82152625_82154925) ins443 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 82,152,625 | 82,154,925 | 82,152,625 | 82,154,925 |
| essv7843574 | Remapped | Perfect | NC_000003.11:g.(82 201776_82204076)_( 82201776_82204076) ins443 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 82,201,776 | 82,204,076 | 82,201,776 | 82,204,076 |
| essv7843574 | Submitted genomic | NC_000003.10:g.(82 284466_82286766)_( 82284466_82286766) ins443 | NCBI36 (hg18) | NC_000003.10 | Chr3 | 82,284,466 | 82,286,766 | 82,284,466 | 82,286,766 |