esv29972
- Organism: Homo sapiens
- Study:estd22 (Levy et al. 2007)
- Variant Type:copy number variation
- Method Type:Oligo aCGH, SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:918,680
- Publication(s):Levy et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2453 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 1715 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 1006 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 486 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv29972 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 154,781,072 | 155,699,751 |
| esv29972 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 154,418,093 | 154,929,412 |
| esv29972 | Remapped | Good | GRCh37.p13 | PATCHES | First Pass | NW_003871103.3 | ChrX|NW_00 3871103.3 | 2,215,051 | 3,110,903 |
| esv29972 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 153,662,541 | 154,582,606 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv84211 | Remapped | Good | NC_000023.11:g.(?_ 154781072)_(155699 751_?)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 154,781,072 | 155,699,751 |
| essv84211 | Remapped | Good | NW_003871103.3:g.( ?_2215051)_(311090 3_?)dup | GRCh37.p13 | First Pass | NW_003871103.3 | ChrX|NW_00 3871103.3 | 2,215,051 | 3,110,903 |
| essv84211 | Remapped | Pass | NC_000023.10:g.(?_ 154418093)_(154929 412_?)dup | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 154,418,093 | 154,929,412 |
| essv84211 | Submitted genomic | NC_000023.9:g.(?_1 53662541)_(1545826 06_?)dup | NCBI36 (hg18) | NC_000023.9 | ChrX | 153,662,541 | 154,582,606 |