esv2445273
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,520
- Description:originalFile=Yoruban_large_indels_8.4x.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1093 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 963 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 237 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 504 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| esv2445273 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,705,732 | - | 106,707,251 |
| esv2445273 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 107,161,748 | - | 107,162,502 |
| esv2445273 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_004166863.1 | Chr14|NW_0 04166863.1 | - | 1,369,713 | 1,370,418 |
| esv2445273 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000014.7 | Chr14 | 106,232,793 | - | 106,233,547 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| essv5320458 | Remapped | Pass | NC_000014.9:g.(106 705732_?)_(?_10670 7251)ins? | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,705,732 | - | 106,707,251 |
| essv5320458 | Remapped | Pass | NW_004166863.1:g.( ?_1369713)_(?_1370 418)ins? | GRCh37.p13 | Second Pass | NW_004166863.1 | Chr14|NW_0 04166863.1 | - | 1,369,713 | 1,370,418 |
| essv5320458 | Remapped | Perfect | NC_000014.8:g.(107 161748_?)_(?_10716 2502)ins? | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 107,161,748 | - | 107,162,502 |
| essv5320458 | Submitted genomic | NC_000014.7:g.(106 232793_?)_(?_10623 3547)ins? | NCBI36 (hg18) | NC_000014.7 | Chr14 | 106,232,793 | - | 106,233,547 |