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dbVar

Database of genomic structural variation

esv1679496

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:13,200

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 573 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):49,715,000-49,728,196

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1679496	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	49,715,000	49,728,196
esv1679496	Remapped	Good	GRCh38.p12	PATCHES	Second Pass	NW_019805495.1	Chr11\|NW_0 19805495.1	179,146	192,345
esv1679496	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	49,736,552	49,749,748
esv1679496	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000011.8	Chr11	49,693,128	49,706,324

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv4272661	inversion	HuRef	Sequencing	Sequence alignment	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv4272661	Remapped	Good	NW_019805495.1:g.1 79146_192345inv	GRCh38.p12	Second Pass	NW_019805495.1	Chr11\|NW_0 19805495.1	179,146	192,345
essv4272661	Remapped	Perfect	NC_000011.10:g.497 15000_49728196inv	GRCh38.p12	First Pass	NC_000011.10	Chr11	49,715,000	49,728,196
essv4272661	Remapped	Perfect	NC_000011.9:g.4973 6552_49749748inv	GRCh37.p13	First Pass	NC_000011.9	Chr11	49,736,552	49,749,748
essv4272661	Submitted genomic		NC_000011.8:g.4969 3128_49706324inv	NCBI36 (hg18)		NC_000011.8	Chr11	49,693,128	49,706,324

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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