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dbVar

Database of genomic structural variation

esv1121377

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:19,512

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 454 SVs from 37 studies. See in: genome view

Remapped(Score: Good):46,951,601-46,971,112

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1121377	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	46,951,601	46,971,112
esv1121377	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	46,810,804	46,830,688
esv1121377	Remapped	Good	GRCh37.p13	PATCHES	Second Pass	NW_004166866.1	ChrX\|NW_00 4166866.1	201,162	220,673
esv1121377	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000023.9	ChrX	46,695,748	46,715,632

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv4075882	inversion	HuRef	Sequencing	Sequence alignment	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv4075882	Remapped	Good	NC_000023.11:g.469 51601_46971112inv	GRCh38.p12	First Pass	NC_000023.11	ChrX	46,951,601	46,971,112
essv4075882	Remapped	Good	NW_004166866.1:g.2 01162_220673inv	GRCh37.p13	Second Pass	NW_004166866.1	ChrX\|NW_00 4166866.1	201,162	220,673
essv4075882	Remapped	Perfect	NC_000023.10:g.468 10804_46830688inv	GRCh37.p13	First Pass	NC_000023.10	ChrX	46,810,804	46,830,688
essv4075882	Submitted genomic		NC_000023.9:g.4669 5748_46715632inv	NCBI36 (hg18)		NC_000023.9	ChrX	46,695,748	46,715,632

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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