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dbVar

Database of genomic structural variation

esv1005753

Organism: Homo sapiens

Study:estd180 (Pang et al. 2010)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:49,707

Publication(s):Pang et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2361 SVs from 99 studies. See in: genome view

Remapped(Score: Good):46,489,592-46,539,298

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Outer Stop
esv1005753	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	-	46,489,592	46,539,298
esv1005753	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	47,010,319	-	47,062,207
esv1005753	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000010.9	Chr10	46,430,325	-	46,482,213

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv3565554	inversion	HuRef	Sequencing	Paired-end mapping	23,887

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Outer Stop
essv3565554	Remapped	Good	NC_000010.11:g.(?_ 46489592)_(?_46539 298)inv51889	GRCh38.p12	First Pass	NC_000010.11	Chr10	-	46,489,592	46,539,298
essv3565554	Remapped	Perfect	NC_000010.10:g.(47 010319_?)_(?_47062 207)inv51889	GRCh37.p13	First Pass	NC_000010.10	Chr10	47,010,319	-	47,062,207
essv3565554	Submitted genomic		NC_000010.9:g.(464 30325_?)_(?_464822 13)inv51889	NCBI36 (hg18)		NC_000010.9	Chr10	46,430,325	-	46,482,213

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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