esv3890623
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:40
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 152 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 152 SVs from 33 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3890623 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| esv3890623 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| essv25778150 | mobile element insertion | SAMN01091133 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,963 |
| essv25778151 | mobile element insertion | SAMN00255125 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,547 |
| essv25778152 | mobile element insertion | SAMN00630198 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,096 |
| essv25778153 | mobile element insertion | SAMN00630200 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,059 |
| essv25778154 | mobile element insertion | SAMN00262971 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,221 |
| essv25778155 | mobile element insertion | SAMN00262974 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,255 |
| essv25778156 | mobile element insertion | SAMN00630238 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,511 |
| essv25778157 | mobile element insertion | SAMN01091043 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,937 |
| essv25778158 | mobile element insertion | SAMN00630244 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,890 |
| essv25778159 | mobile element insertion | SAMN01091046 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,078 |
| essv25778160 | mobile element insertion | SAMN01091056 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,207 |
| essv25778161 | mobile element insertion | SAMN00779942 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,199 |
| essv25778162 | mobile element insertion | SAMN00779970 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,154 |
| essv25778163 | mobile element insertion | SAMN00779984 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,185 |
| essv25778164 | mobile element insertion | SAMN00779987 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,263 |
| essv25778165 | mobile element insertion | SAMN01090776 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,137 |
| essv25778166 | mobile element insertion | SAMN01036779 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,152 |
| essv25778167 | mobile element insertion | SAMN01761235 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,251 |
| essv25778168 | mobile element insertion | SAMN01090797 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,871 |
| essv25778169 | mobile element insertion | SAMN01090772 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,143 |
| essv25778170 | mobile element insertion | SAMN01761243 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,270 |
| essv25778171 | mobile element insertion | SAMN01761292 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,255 |
| essv25778172 | mobile element insertion | SAMN01036822 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,231 |
| essv25778173 | mobile element insertion | SAMN01090886 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,245 |
| essv25778174 | mobile element insertion | SAMN01090775 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,054 |
| essv25778175 | mobile element insertion | SAMN01090841 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,952 |
| essv25778176 | mobile element insertion | SAMN01761322 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,259 |
| essv25778177 | mobile element insertion | SAMN01090818 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,288 |
| essv25778178 | mobile element insertion | SAMN01090838 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,045 |
| essv25778179 | mobile element insertion | SAMN01090817 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,060 |
| essv25778180 | mobile element insertion | SAMN01090822 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,090 |
| essv25778181 | mobile element insertion | SAMN01090825 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,024 |
| essv25778182 | mobile element insertion | SAMN00001022 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,306 |
| essv25778183 | mobile element insertion | SAMN00001630 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,334 |
| essv25778184 | mobile element insertion | SAMN00000479 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,240 |
| essv25778185 | mobile element insertion | SAMN00001675 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,942 |
| essv25778186 | mobile element insertion | SAMN00000557 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,838 |
| essv25778187 | mobile element insertion | SAMN00001686 | Sequencing | Read depth and paired-end mapping | Homozygous | 2,632 |
| essv25778188 | mobile element insertion | SAMN00000574 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,099 |
| essv25778189 | mobile element insertion | SAMN00007700 | Sequencing | Read depth and paired-end mapping | Homozygous | 3,096 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv25778150 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778151 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778152 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778153 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778154 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778155 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778156 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778157 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778158 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778159 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778160 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778161 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778162 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778163 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778164 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778165 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778166 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778167 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778168 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778169 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778170 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778171 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778172 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778173 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778174 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778175 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778176 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778177 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778178 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778179 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778180 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778181 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778182 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778183 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778184 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778185 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778186 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778187 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778188 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778189 | Remapped | Perfect | NC_000012.12:g.975 0455_9750456ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 9,750,455 | 9,750,455 |
| essv25778150 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778151 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778152 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778153 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778154 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778155 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778156 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778157 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778158 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778159 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778160 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778161 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778162 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778163 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778164 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778165 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778166 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778167 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778168 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778169 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778170 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778171 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778172 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778173 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778174 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778175 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778176 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778177 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778178 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778179 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778180 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778181 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778182 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778183 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778184 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778185 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778186 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778187 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778188 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 | ||
| essv25778189 | Submitted genomic | NC_000012.11:g.990 3051_9903052ins? | GRCh37 (hg19) | NC_000012.11 | Chr12 | 9,903,051 | 9,903,051 |