| | | Deletion (frameshift variant) | Holoprosencephaly 5 | |
| | | Single nucleotide variant (missense variant +2 more) | Cerebral cavernous malformation 2 | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (nonsense) | Intellectual disability, X-linked 93 | |
| | | Single nucleotide variant (nonsense) | Heterotopia, periventricular, X-linked dominant | |
| | | Duplication (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6 | |
| | | Single nucleotide variant (missense variant) | Ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant +1 more | |
| | | Deletion (frameshift variant +1 more) | Cerebral cavernous malformation | |
| | | Duplication (frameshift variant) | Cerebral cavernous malformation +1 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (nonsense) | Simpson-Golabi-Behmel syndrome type 1 | |
| | | Duplication (frameshift variant +2 more) | Gorlin syndrome | |
| | | Single nucleotide variant (missense variant) | X-linked hydrocephalus syndrome | |
| | FMO3, LOC126805916 (G148R +2 more) | Single nucleotide variant (missense variant) | Trimethylaminuria | |
| | LOC126805916, FMO3 (Q124* +2 more) | Single nucleotide variant (nonsense) | not provided +1 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant) | Rubinstein-Taybi syndrome due to CREBBP mutations | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Septo-optic dysplasia sequence +3 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (nonsense +1 more) | not provided +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (nonsense) | Ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant | |
| | | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 | |
| | | Single nucleotide variant (stop lost +1 more) | not provided | |
| | | Single nucleotide variant (missense variant) | Autosomal recessive hypohidrotic ectodermal dysplasia syndrome +1 more | |