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SNP FAQ Archive [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2005-.

  • This publication is provided for historical reference only and the information may be out of date.

This publication is provided for historical reference only and the information may be out of date.

Searching for SNPs in Raw Sequence Data

Created: ; Last Update: February 25, 2014.

Can NCBI provide me with a tool that will aid me in identifying SNPs from raw sequence data?

NCBI doesn't have a tool for identifying SNPs, but the Sanger institute offers a polymorphism detection tool called “ssahaSNP” for academic use, and you can always try searching PubMed for publication information on SNP detection software. (1/30/06)

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