Escherichia coli MS 116-1 (ID 47229) - BioProject

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Accession: PRJNA47229 ID: 47229

Escherichia coli MS 116-1

Demonstration Project Reference Genome for Human Microbiome Project

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)

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8910 additional projects are related by organism.

2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

Accession	PRJNA47229
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Escherichia coli MS 116-1[Taxonomy ID: 749538] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 116-1
Submission	Registration date: 21-May-2010 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Locus Tag Prefix	HMPREF9541

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	626
WGS master	1
SRA Experiments	1
Protein Sequences	5162
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000164475.1	Scaffold	ADTZ00000000	SAMN00189165	Escherichia coli MS 116-1

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	291

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Escherichia coli MS 116-1

Demonstration Project Reference Genome for Human Microbiome Project

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