Escherichia coli MS 85-1 (ID 40699) - BioProject

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Accession: PRJNA40699 ID: 40699

Escherichia coli MS 85-1

Demonstration Project Reference Genome for Human Microbiome Project

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)

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8892 additional projects are related by organism.

2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

Accession	PRJNA40699
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Escherichia coli MS 85-1[Taxonomy ID: 679202] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 85-1
Submission	Registration date: 30-Jun-2010 WUGSC
Locus Tag Prefix	HMPREF9350

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	235
WGS master	1
SRA Experiments	3
Protein Sequences	5994
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000179075.1	Contig	ADWQ00000000	SAMN00189188	Escherichia coli MS 85-1

SRA Data Details

Parameter	Value
Data volume, Mbases	77
Data volume, Mbytes	165

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Escherichia coli MS 85-1

Demonstration Project Reference Genome for Human Microbiome Project

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