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Accession: PRJNA40009 ID: 40009

Bacteroides eggerthii 1_2_48FAA

Reference sequence for Human Microbiome Project

See Genome Information for Bacteroides eggerthii
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
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3 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
Reference genome for the Human Microbiome Project.

Another assembly of this organism was generated independently from the HMP reference genome, using PacBio and Illumina sequence reads.

AccessionPRJNA40009
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismBacteroides eggerthii 1_2_48FAA[Taxonomy ID: 665953]
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides eggerthii; Bacteroides eggerthii 1_2_48FAA
PublicationsRibeiro FJ et al., "Finished bacterial genomes from shotgun sequence data.", Genome Res, 2012 Nov;22(11):2270-7
SubmissionRegistration date: 4-Jan-2011
Broad Institute
- Broad Institute
Locus Tag PrefixHMPREF1016
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)156
WGS master2
SRA Experiments28
Protein Sequences3862
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases17
Data volume, Mbytes28820

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