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IDs: 20122481 [UID] 50977048 [GenBank] 52777118 [RefSeq]
The assembly fOsmEpe2.1 is based on 46x PacBio data and Arima2 Hi-C data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm, retained haplotig separation ... with purge_dups, and Hi-C based scaffolding with YaHS. The mitochondrial genome was assembled using MitoHiFi. Finally, the primary assembly was analysed and manually improved using rapid curation. Chromosome-scale scaffolds confirmed by the Hi-C data have been named in order of size. the exact order an orientation of scaffolds in the repetitive region on chromosome 4 (0-1.8M bp) is unknown. more
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